PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_12623
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 178aa    MW: 19118.8 Da    PI: 10.0563
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_12623genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.52.9e-122572656
         AP2  6 VrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +r++ +  r++ eIrdp++   ++r++lg+f++ae+Aa+a++ a+++l+g+
  PEQU_12623 25 IRFRAREVRFAPEIRDPVK---KTRVWLGTFDSAEDAARAYDVAARELRGP 72
                6788888888889***643...5**************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.6621379IPR001471AP2/ERF domain
SMARTSM003803.6E-232585IPR001471AP2/ERF domain
CDDcd000181.86E-222879No hitNo description
Gene3DG3DSA:3.30.730.105.5E-232879IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-153280IPR016177DNA-binding domain
PfamPF008473.2E-64371IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MRKGRSPAAG VARLAGAPPP PPKEIRFRAR EVRFAPEIRD PVKKTRVWLG TFDSAEDAAR  60
AYDVAARELR GPKAKTNFPP LIAGSVPRVP TSSGMSSTVE SFSGPRISIP RPPSIRPPAN  120
PGPLRVLTGE EDCHSDCGSS SSVVDDGDVA SDYRKPLPFD LNLLPPLSDD LQSTVLRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010943239.12e-50PREDICTED: ethylene-responsive transcription factor 3-like
RefseqXP_010943238.12e-50PREDICTED: ethylene-responsive transcription factor 3-like
TrEMBLW8Q9043e-83W8Q904_9ASPA; EREB1
STRINGGSMUA_Achr4P06170_0012e-44(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61022347
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.17e-15ethylene responsive element binding factor 4